| Version 1.15 | Release Cipres Portal 2.0 | ||
|---|---|---|---|
| Version 1.14 | Add REST Service to retrive list of job links for a given email address | ||
| Version 1.13 | Support for BOOTSTRAP-RAxML REST Service | ||
| Upgrade RAxML to version 7.0.4 | |||
| Version 1.12 | Support for large file uploads | ||
| Upgrade RAxML to version 7.0.3 | |||
| Version 1.11 | Merge RAxML-Bootstrapping to main portal | ||
| Upgrade RAxML to version 7.0.2 | |||
| Support for ML GTR+I+G with RAxML | |||
| Version 1.10 | Graphical web tool for viewing and drawing trees | ||
| Bootstrapping tool preserves Taxon names with more than 10 characters | |||
| Version 1.09 | REST Web Services API release | ||
| Support for MrBayes | |||
| Version 1.08 | REC-I-DCM3 for PAUP supported for datasets over 100 taxa | ||
| Bootstrapping for RAxML supported | |||
| Support for ClustalW | |||
| Version 1.07 | Real time plots of job progress (every automatically every 5 mins); | ||
| Users can request to run a job for more than 72 hours. | |||
| Improvements to (hidden) adminstrative tools for improved traffic analysis. | |||
| Version 1.06 | Added ability of user to control jobs through Java applet called Guigen | ||
| Added support for Hennig86 | |||
| Added support for bootstrapping with PAUP | |||
Version 1.05 |
Repair of the NCL parser to handle symbols | ||
| Improved documentation of error messages | |||
| Improved documentation of accepted formats | |||
| Improved documentation of default values for programs | |||
Version 1.04 |
Nexus parser tolerates gaps in morphological data | ||
| Resolve Safari browser errors | |||
| Note phylip files accepted | |||
| C parser improvements allow Morphobank files to be accepted | |||
| Rec-I-DCM3/RAxML enabled | |||
Version 1.03 |
Implement intermediate trees for RAxML and Garli | ||
| Improved/debugged phylip translator | |||
| Ability to infer trees for Garli/RAxML when not provided | |||
| Add new testing scripts | |||
| Replace the trouble mail link with a web form | |||
| Version 1.02 | Support for Phylip format data | ||
| Use proxy:push consumer to collect the intermediate trees for Garli | |||
| Post intermediate trees for user access as Nexus file | |||
| Windows and Mac binaries can use local environment variables | |||
Version 1.01 |
Amino acids supported as input for Garli. | ||
| Present "sequence type" information from Nexus file (protein/dna) | |||
| Precheck RAxML input for data type: alert if Protein | |||
| Improve timeout handling | |||
| Allow user to collect the intermediate trees for Garli run | |||
| Reorganize runserviceapp | |||
| Prevent clash of parsimony lengths for ML | |||
| set deault = no branch length for RAxML and GARLI | |||
| set default = no branch lengths for first iteration of RIDCM3 | |||
| Set logic for the guide tree selection | |||
| set default = paupInfer for PAUP guide trees | |||
| set default = quickInfer for RAxML/Garli guide trees | |||
Version 1.00 |
Initial release | ||
| Support for Likelihood (Garli and RAxML) | |||
| Support for Parsimony (PAUP) | |||