ReST Description
The selection offered for tools and analyses is based on the Datatype, Ntaxa, and Dataset Format specifed in your uploaded file. Currently, we accept NEXUS, PHYLIP, and HENNIG86 formatted files. FASTA files are also accepted for Multiple Sequence Alignment (CLUSTALW). |
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| DNA_DATATYPE | RNA_DATATYPE | AA_DATATYPE | ALL OTHERS | |||||||||
| ML GTR+I+G |
GARLI RAxML |
GARLI RAxML |
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| ML GTR+G |
RAxML Rec-I-DCM3(RAxML) (ntax ≥ 500) GARLI |
RAxML Rec-I-DCM3(RAxML) (ntax ≥ 500) GARLI |
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| WAG+Gamma+F |
RAxML Rec-I-DCM3(RAxML) (ntax ≥500) |
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| MP |
PAUP* Rec-I-DCM3(PAUP*) (ntax ≥100) |
PAUP* Rec-I-DCM3(PAUP*) (ntax ≥100) |
PAUP* Rec-I-DCM3(PAUP*) (ntax ≥100) |
PAUP* Rec-I-DCM3(PAUP) (ntax ≥ 100) |
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| MSA |
ClustalW (FASTA datasets only) |
ClustalW (FASTA datasets only) |
ClustalW (FASTA datasets only) |
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| BI |
MrBayes |
MrBayes |
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| BOOTSTRAP | RAxML-Boot |
RAxML-Boot |
RAxML-Boot |
RAxML-Boot |
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