Probcons

ProbCons

ProbCons is a novel tool for generating multiple alignments of protein sequences using a combination of probabilistic modeling and consistency-based alignment techniques.

A manual for ProbCons is available. [pdf]

ProbCons home page here.

INPUT = dna or protein sequences in multiple fasta format (MFA).

Test input file (amino acid): probcons_input.txt

If you use ProbCons, please cite:

Do, C.B., Mahabhashyam, M.S.P., Brudno, M., and Batzoglou, S. 2005. PROBCONS: Probabilistic Consistency-based Multiple Sequence Alignment. Genome Research 15: 330-340.[doi.org/10.1101%2Fgr.2821705]

Copyright © 2004-2009 Chuong Do

If you would like to add a tool, or a feature you need, let us know.

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