Publications 2014 B

  1. Eckert, E. M., and Pernthaler, J. (2014) Bacterial epibionts of Daphnia: a potential route for the transfer of dissolved organic carbon in freshwater food webs. The ISME Journal 8, 1808-1819.
  2. Campbell, M. A., López, J. A., Satoh, T. P., Chen, W.-J., and Miya, M. (2014) Mitochondrial genomic investigation of flatfish monophyly. Gene 551, 176-182.
  3. Pérez, W., Hall, J. D., McCourt, R. M., and Karol, K. G. (2014) Phylogeny of North American Tolypella (Charophyceae, Charophyta) based on plastid DNA sequences with a description of Tolypella ramosissima sp. nov. Journal of Phycology 50, 776-789.
  4. Almeida, A. O., Terossi, M., and Mantelatto, F. L. (2014) Morphology and DNA analyses reveal a new cryptic snapping shrimp of the Alpheus heterochaelis Say, 1818 (Decapoda: Alpheidae) species complex from the western Atlantic. Zoosystema 36, 53-71.
  5. Pabón-Mora, N., et al. (2014). "Evolution of fruit development genes in flowering plants." Frontiers in Plant Science 5.
  6. Panero, J. L., et al. (2014). "Resolution of deep nodes yields an improved backbone phylogeny and a new basal lineage to study early evolution of Asteraceae." Mol. Phylogenet. Evol. 80: 43-53.
  7. Pardiñas, U. F. J., et al. (2014). "A new genus of sigmodontine rodent from eastern Brazil and the origin of the tribe Phyllotini." Journal of Mammalogy 95(2): 201-215.
  8. Poengsungnoen, V., et al. (2014). "Phylogenetic analysis reveals two morphologically unique new species in the genera Astrochapsa and Nitidochapsa (lichenized Ascomycota: Graphidaceae)." Phytotaxa 189(1): 268–281.
  9. Puillandre, N., et al. (2014). "Molecular phylogeny and evolution of the cone snails (Gastropoda, Conoidea)." Mol Phylogenet Evol. 78(290-303).
  10. Puppo, P., et al. (2014). "The influence of geological history on diversification in insular species: genetic and morphological patterns of Micromeria Benth. (Lamiaceae) in Tenerife (Canary archipelago)." Journal of Biogeography 41(10): 1871-1882.
  11. Quandt, C. A., et al. (2014). "Phylogenetic-based nomenclatural proposals for Ophiocordycipitaceae (Hypocreales) with new combinations in Tolypocladium." IMA Fungus 5(1): 121-134.
  12. Ravich, M. L., et al. (2014). "Gastrointestinal Cryptosporidiosis in Captive Psittacine Birds in the United States: A Case Review." Journal of Avian Medicine and Surgery 28(4): 297-303.
  13. Rodriguez, J., et al. (2014). "Assessing Species Boundaries and Sex-Associations in the Genus Drepanaporus (Hymenoptera: Pompilidae), With Comparison of the Utility of Cytochrome c Oxidase I and a Nuclear Molecular Marker, and the Description of a New Species of Drepanaporus." Annals of the Entomological Society of America 107(4): 709-720
  14. Rodriguez, J., et al. (2014). "Müllerian Mimicry as a Result of Codivergence between Velvet Ants and Spider Wasps." PLoS ONE 9(11): e112942.
  15. Rosel, P. E. and L. A. Wilcox (2014). "Genetic evidence reveals a unique lineage of Bryde’s whales in the northern Gulf of Mexico." Endangered Species Research 25(1): 19-34.
  16. Senés-Guerrero, C., et al. (2014). "Potato-associated arbuscular mycorrhizal fungal communities in the Peruvian Andes." Mycorrhiza 24(6): 405-417.
  17. Ševčík, J., et al. (2014). Molecular phylogeny of Bibionomorpha (Diptera): current state of knowledge. . 8th International Congress of Dipterology, Potsdam.
  18. Sim, R. R., et al. (2015). "Identification of a novel herpesvirus in captive Eastern box turtles (Terrapene carolina carolina)." Veterinary Microbiology 175(2–4): 218-223.
  19. Stefanik, D., et al. (2014). "Production of a reference transcriptome and transcriptomic database (EdwardsiellaBase) for the lined sea anemone, Edwardsiella lineata, a parasitic cnidarian." BMC Genomics 15(1): 71.
  20. Stieglmeier, M., et al. (2014). "Nitrososphaera viennensis gen. nov., sp. nov., an aerobic and mesophilic, ammonia-oxidizing archaeon from soil and a member of the archaeal phylum Thaumarchaeota." International Journal of Systematic and Evolutionary Microbiology 64(Pt 8): 2738-2752.
  21. Thambugala, K. M., et al. (2014). "Multi-Locus Phylogeny Reveals the Sexual State of Tiarosporella in Botryosphaeriaceae." Cryptogamie, Mycologie 35(4): 359-367.
  22. Thomson, R. C., et al. (2014). "A critical appraisal of the use of microRNA data in phylogenetics." Proceedings of the National Academy of Sciences 111(35): E3659-E3668.
  23. Tillmann, U., et al. (2014). "Morphological and Molecular Characterization of Three New Azadinium Species (Amphidomataceae, Dinophyceae) from the Irminger Sea." Protist 165(4): 417-444.
  24. Tkoč, M., et al. (2014). Phylogeny of Platypezidae: Is Microsania a platypezid? . 8th International Congress of Dipterology, Postdam.
  25. Toome, M. and M. Aime (2014). "Pycnopulvinus aurantiacus gen. et sp. nov., a new sporocarp-forming member of Pucciniomycotina." MycoKeys 8: 43-50.
  26. Tourna, M., et al. (2011). "Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil." Proceedings of the National Academy of Sciences 108(20): 8420-8425.
  27. Vesterholt, J., et al. (2014). "Epitypification of Hebeloma crustuliniforme." Mycological Progress 13(3): 553-562.
  28. Vogelmann, K., et al. (2014). "Plasma membrane-association of SAUL1-type plant U-box armadillo repeat proteins is conserved in land plants." Frontiers in Plant Science 5: 37.
  29. Wahlberg, N., et al. (2014). "Revised systematics and higher classification of pierid butterflies (Lepidoptera: Pieridae) based on molecular data." Zoologica Scripta 43(6): 641-650.
  30. Wallace, E. M. (2014). Assessing Biodiversity, Evolution, and Biogeography in Bonefishes (Albuliformes): Resolving Relationships and Aiding Management Conservation Biology, Univeristy of Minnesota: 124.
  31. Zaspel, J. M., et al. (2014). "Genetic characterization and geographic distribution of the fruit-piercing and skin-piercing moth Calyptra thalictri Borkhausen (Lepidoptera: Erebidae). ." Journal of Parasitology 100(5): 583-591.
  32. Zhou, X., et al. (2014). "The complete mitochondrial genomes of sixteen ardeid birds revealing the evolutionary process of the gene rearrangements." BMC Genomics 15(1): 573.
  33. Ziegler, J. and A. Tóthová (2014). What is a rhinophorid fly? A new perspective to an old question - based on DNA sequences. 8th International Congress of Dipterology, Potsdam
  34. Danies, G., Myers, K., Mideros, M. F., Restrepo, S., Martin, F. N., Cooke, D. E. L., Smart, C. D., Ristaino, J. B., Seaman, A. J., Gugino, B. K., Grunwald, N. J., and Fry, W. E. (2014) An Ephemeral Sexual Population of Phytophthora infestans in the Northeastern United States and Canada. Plos One 9
  35. Kenney, J. L., Solberg, O. D., Langevin, S. A., and Brault, A. C. (2014) Characterization of a novel insect-specific flavivirus from Brazil: potential for inhibition of infection of arthropod cells with medically important flaviviruses. J Gen Virol 95, 2796-2808
  36. Xu, Y., Yan, Y., Li, L. F., Al-Rasheid, K. A. S., Al-Farraj, S. A., and Song, W. B. (2014) Morphology and phylogeny of three karyorelictean ciliates (Protista, Ciliophora), including two novel species, Trachelocerca chinensis sp n. and Tracheloraphis dragescoi sp n. Int. J. Syst. Evol. Microbiol. 64, 4084-4097
  37. Yuzon, J., Roux, C., Lendemer, J. C., and Gueidan, C. (2014) Molecular phylogeny and taxonomy of the endolithic lichen genus Bagliettoa (Ascomycota: Verrucariaceae). Taxon 63, 1177-1192
  38. Rojas-Pina, V., Olson, M. E., Alvarado-Cardenas, L. O., and Eguiarte, L. E. (2014) Molecular phylogenetics and morphology of Beaucarnea (Ruscaceae) as distinct from Nolina, and the submersion of Calibanus into Beaucarnea. Taxon 63, 1193-1211
  39. Puttamuk, T., Zhou, L. J., Thaveechai, N., Zhang, S. A., Armstrong, C. M., and Duan, Y. P. (2014) Genetic Diversity of Candidatus Liberibacter asiaticus Based on Two Hypervariable Effector Genes in Thailand. Plos One 9
  40. Lapoint, R. T., Magnacca, K. N., and O'Grady, P. M. (2014) Phylogenetics of the Antopocerus-Modified Tarsus Clade of Hawaiian Drosophila: Diversification across the Hawaiian Islands. Plos One 9
  41. Guan, Q. X., Chen, G. Z., Li, M. H., and Chen, S. P. (2014) Goodyera malipoensis (Cranichideae, Orchidaceae), a new species from China: Evidence from morphological and molecular analyses. Phytotaxa 186, 51-60
  42. Vahtera, V., and Edgecombe, G. D. (2014) First Molecular Data and the Phylogenetic Position of the Millipede-Like Centipede Edentistoma octosulcatum Tomosvary, 1882 (Chilopoda: Scolopendromorpha: Scolopendridae). Plos One 9.
  43. Peng, D., Gu, X., Xue, L. J., Leebens-Mack, J. H., and Tsai, C. J. (2014) Bayesian phylogeny of sucrose transporters: ancient origins, differential expansion and convergent evolution in monocots and dicots. Frontiers in Plant Science 5
  44. Korehi, H., Blothe, M., and Schippers, A. (2014) Microbial diversity at the moderate acidic stage in three different sulfidic mine tailings dumps generating acid mine drainage. Res. Microbiol. 165, 713-718
  45. Justo, A., Malysheva, E., Bulyonkova, T., Vellinga, E. C., Cobian, G., Nguyen, N., Minnis, A. M., and Hibbett, D. S. (2014) Molecular phylogeny and phylogeography of Holarctic species of Pluteus section Pluteus (Agaricales: Pluteaceae), with description of twelve new species. Phytotaxa 180, 1-85.
  46. Song, W., Li, J., Liu, W., Al-rasheid, K. A. S., Hu, X., and Lin, X. (2014) Taxonomy and molecular phylogeny of four Strombidium species, including description of S. pseudostylifer sp. nov. (Ciliophora, Oligotrichia). Systematics and Biodiversity 13, 76-92.
  47. Fana, Y., Pana, Y., Huangb, J., Linc, X., Hua, X., and Warrend, A. (2014) Eukaryotic Microbiology. Journal of Eukaryotic Microbiology 61, 449-462.
  48. Latorre, D. P. (2014) Pectin remodelling enzymes of flax and their roles in fiber development. PhD. Thesis University of Alberta
  49. Abe, K., Mariguela, T., Avelino, G., Foresti, F., and Oliveira, C. (2014) Systematic and historical biogeography of the Bryconidae (Ostariophysi: Characiformes) suggesting a new rearrangement of its genera and an old origin of Mesoamerican ichthyofauna. BMC Evolutionary Biology 14, 152
  50. Stride, M. C. (2014) Novel chlamydia-like agents of epitheliocystis in wild and cultures Australian finfish. PhD Thesis, University of Tasmania
  51. Geisen, S. (2014) Soil Protists Diversity, Distribution and Ecological Functioning. PhD Thesis, Universität zu Köln
  52. Rybarczyk-Mydłowska, K., van Megen, H., van den Elsen, S., Mooyman, P., Karssen, G., Bakker, J., and Helder, J. (2014) Both SSU rDNA and RNA polymerase II data recognise that root-knot nematodes arose from migratory Pratylenchidae, but probably not from one of the economically high-impact lesion nematodes. Nematology 16, 125-136
  53. Jin, W.-T., Jin, X.-H., Schuiteman, A., Li, D.-Z., Xiang, X.-G., Huang, W.-C., Li, J.-W., and Huang, L.-Q. (2014) Molecular systematics of subtribe Orchidinae and Asian taxa of Habenariinae (Orchideae, Orchidaceae) based on plastid matK, rbcL and nuclear ITS. Molecular Phylogenetics and Evolution 77, 41-53
  54. Ortega-Andrade, H. M., and Venegas, P. J. (2014) A new synonym for Pristimantis luscombei (Duellman and Mendelson 1995) and the description of a new species of Pristimantis from the upper Amazon basin (Amphibia: Craugastoridae). Zootaxa 3895., 31-57
  55. Lee, R., Lai, H., Malik, S. B., Saldarriaga, J. F., Keeling, P. J., and Slamovits, C. H. (2014) Analysis of EST data of the marine protist Oxyrrhis marina, an emerging model for alveolate biology and evolution. BMC Genomics 15, 1-17
  56. Moore, W., and Robertson, James A. (2014) Explosive Adaptive Radiation and Extreme Phenotypic Diversity within Ant-Nest Beetles. Current Biology 24, 2435-2439.
  57. Bauters, K., Larridon, I., Reynders, M., Asselman, P., Vrijdaghs, A., Muasya, A. M., and Goetghebeur, P. (2014) A new classification for Lipocarpha and Volkiella as infrageneric taxa of Cyperus s.l. (Cypereae, Cyperoideae, Cyperaceae): insights from species tree reconstruction supplemented with morphological and floral developmental data. . Phytotaxa 166, 1-32
  58. Beadell, A. V., and Haag, E. S. (2014) Evolutionary Dynamics of GLD-1-mRNA complexes in Caenorhabditis nematodes. . Genome Biol Evol. 7, 314-335.
  59. de Oliveira-Neto, J. F., Baggio, R. A., Ostrensky, A., Chammas, M. A., and Boeger, W. A. (2014) Assessing the genetic diversity and gene flow of populations of the crab (Decapoda: Ocypodidae) on the Brazilian Coast using microsatellite markers. Journal of Crustacean Biology 34, 70-75
  60. Ludwig, S., TschÁ, M. K., Patella, R., Oliveira, A. J., and Boeger, W. A. (2014) Looking for a needle in a haystack: molecular detection of larvae of invasive Corbicula clams. . Management of Biological Invasions 5, 143-149
  61. Boeger, W. A., Marteleto, F. M., Zagonel, L., and Braga, M. P. (2014) Tracking the history of an invasion: the freshwater croakers (Teleostei: Sciaenidae) in South America. . Zoologica Scripta 42
  62. Claramunt, S. (2014) Phylogenetic relationships among Synallaxini spinetails (Aves: Furnariidae) reveal a new biogeographic pattern across the Amazon and Parana river basins. . Molecular Phylogenetics and Evolution 78, 223–231
  63. Fikáček, M., and Vondráček, D. (2014) A review of Pseudorygmodus (Coleoptera: Hydrophilidae), with notes on the classification of the Anacaenini and on distribution of genera endemic to southern South America. . Acta Entomologica Musei Nationalis Pragae 54, 497-514
  64. Machado, L. F., LEITE, Y. L. R., CHRISTOFF, A. U., and GIUGLIANO, L. G. (2014) Phylogeny and biogeography of tetralophodont rodents of the tribe Oryzomyini (Cricetidae: Sigmodontinae). Zoologica Scripta, 43, 119-130.
  65. Menolli Jr., N., Justo, A., Arrillaga, P., Pradeep, C. K., Minnis, A. M., and Capelari, M. (2014) Taxonomy and phylogeny of Pluteus glaucotinctus sensu lato (Agaricales, Basidiomycota), a multi-continental species complex. Phytotaxa    188, 78-90.
  66. Carlson, A., Justo, A., and Hibbett, D. S. (2014) Species delimitation in Trametes: a comparison of ITS, RPB1, RPB2 and TEF1 gene phylogenies. . Mycologia 106, 735–745.
  67. Moran, R. C., Labiak, P. H., Hanks, J. G., and Prado, J. (2014) The Phylogenetic Relationship of Tectaria brauniana and Tectaria nicotianifolia, and the Recognition of Hypoderris (Tectariaceae). . Systematic Botany 39, 384–395.
  68. Labiak, P. H., Sundue, M., Rouhan, G., Hanks, J. G., Mickel, J. T., and Moran, R. C. (2014) Phylogeny and historical biogeography of the lastreopsid ferns (Dryopteridaceae). . American Journal of Botany 101, 1207–1228.
  69. Gardner, S., Salazar–Bravo, J., and Cook, J. (2014) New species of Ctenomys (Rodentia: Ctenomyidae) from Bolivia.    . Museum of Texas Tech University, Special Publication 62, 1-34.
  70. Francisco, S. M., Robalo, J. I., Stefanni, S., and Almada, V. C. (2014) Gaidropsarus (Gadidae, Teleostei) of the North Atlantic: a phylogenetic approach. . Journal of Fish Biology 85, 473-487.
  71. Twomey, E., Delia, J., and Castroviejo-Fisher, S. (2014) A review of Northern Peruvian glassfrogs   (Centrolenidae), with the description of four new remarkable species. Zootaxa 3851, 1–87.
  72. Corby-Harris, V., Schwan, M. R., Snyder, L., Maes, P., and Anderson, K. E. (2014) Origin and effect of Acetobacteraceae Alpha 2.2 in honey bee larvae and description of Parasaccharibacter apium, gen. nov., sp. nov. Applied and Environmental Microbiology. 80.
  73. Waichert, C., Rodriguez, J., Wasbauer, M., von Dohlen, C. D., and Pitts, J. P. (2014) Molecular phylogeny and systematics of spider wasps (Hymenoptera: Pompilidae): redefining subfamily boundaries and the origin of the family. Zoological Journal of the Linnaean Society 175, 271-287.
  74. Salmela J., K. K., Vahtera V. . (2014) Unveiling of a cryptic Dicranomyia (Idiopyga) from northern Finland using integrative approach (Diptera, Limoniidae). . Biodiversity Data Journal 2, e42310.
  75. Glöer, P., and Pešić, V. (2014) New subterranean freshwater gastropods of Montenegro (Mollusca: Gastropoda: Hydrobiidae), with description of one new genus and two new species,
  76. ROY, M., NAGATI, Mélissande, TOMAS, Wesley, GAREIL, Raphaëlle, CLAESSENS, O., LEOTARD, G., SAMBIN, Aurélien , RAVET, Emmanuel , and TOSTAIN, O. (2014) Diversité phylogénétique des orchidées en Guyane Française. in Actes 16e colloque de la Société Française d’Orchidophilie, Blois
  77. Henkel, T. W., Wilson, A. W., Aime, M. C., Dierks, J., Uehling, J. K., Roy, M., Schimann, H., Wartchow, F., and Mueller, G. M. (2014) Cantharellaceae of Guyana II. New species of Craterellus, new distribution records for Cantharellus guyanensis Mont. and Craterellus excelsus TW Henkel & Aime, and a key to the Neotropical taxa. Mycologia 106, 307-332
  78. Wu, L., Chen, R., Yi, Z., Li, J., Warren, A., and Lin, X. F. (2014) The morphology of three Loxophyllum species (Ciliophora, Pleurostomatida) from southern China, L. lembum sp. n., L. vesiculosum sp. n. and L. perihoplophorum Buddenbrock, 1920, with notes on the molecular phylogeny of Loxophyllum. J Eukaryot Microbiol 61, 115-125
  79. Portillo, F., and Greenbaum, E. (2014) A New Species of the Leptopelis modestus Complex (Anura: Arthroleptidae) from the Albertine Rift of Central Africa A New Species of the Leptopelis modestus Complex (Anura: Arthroleptidae) from the Albertine Rift of Central Africa. Journal of Herpetology 48, 394-406
  80. Portillo, F., and Greenbaum, E. (2014) At the edge of a species boundary:  A new and relatively young species of Leptopelis (Anura: Arthroleptidae) from the Itombwe Plateau, Democratic Republic of the Congo. . Herpetologica 70, 100–119
  81. Luque, I., and Ochoa de Alda, J. A. G. (2014) CURT1,CAAD-containing aaRSs, thylakoid curvature and gene translation. Trends in Plant Science 19, 63-66
  82. Bui, E. N., Thornhill, A., and Miller, J. T. (2014) Salt- and alkaline-tolerance are linked in Acacia. Biology letters 10, 20140278
  83. Mishler, B. D., Knerr, N., González-Orozco, C. E., Thornhill, A. H., Laffan, S. W., and Miller, J. T. (2014) Phylogenetic measures of biodiversity and neo- and paleo-endemism in Australian Acacia. Nature Communications 5, 4473
  84. Perl, R. G. B., Zoltán, T. N., Gontran, S., Frank, G., Katharina, C. W., and Miguel, V. (2014) DNA barcoding Madagascar’s amphibian fauna. Amphibia-Reptilia 35, 197-206
  85. Pante, E., Abdelkrim, J., Viricel, A., Gey, D., France, S. C., Boisselier, M. C., and Samadi, S. (2014) Use of RAD sequencing for delimiting species. Heredity 114, 450
  86. Moazzeni, H., Zarre, S., Pfeil, B. E., Bertrand, Y. J. K., German, D. A., Al-Shehbaz, I. A., Mummenhoff, K., and Oxelman, B. (2014) Phylogenetic perspectives on diversification and character evolution in the species-rich genus Erysimum (Erysimeae; Brassicaceae) based on a densely sampled ITS approach. Botanical Journal of the Linnean Society 175, 497-522
  87. Giribet, G., McIntyre, E., Christian, E., Espinasa, L., Ferreira, R. L., Francke, Ó. F., Harvey, M. S., Isaia, M., Kováč, Ĺ., McCutchen, L., Souza, M. F. V. R., and Zagmajster, M. (2014) The first phylogenetic analysis of Palpigradi (Arachnida) – the most enigmatic arthropod order. Invertebrate Systematics 28, 350-360, 311

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