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Welcome to CIPRES, a public resource for phylogenetics and population biology.

CIPRES provides all researchers with a simple browser interface for access to community codes run efficiently on large computational resources of the NSF ACCESS project. You can also access these same capabilities programatically via the CIPRES REST API. Geneious Prime USERS! Our Geneious Plugin allows you to run MrBayes, RAxML, and IQ-Tree on CIPRES.

High Performance Parallel Codes for Large Tree Inference, Sequence Alignment, and Population Biology: including RAxML, MrBayes, BEAST, BEAST2, IQ-Tree and more.
Complete parallel code list here.

Serial Codes for Sequence Alignment:
ClustalW; Divvier; MPBOOT; PREQUAL; PROBCONS; and PROBALIGN

Sign up now, and get 1000 hours of compute time for free!

If you need more time, try our tiered subscription service.

Join the CIPRES Google Group for questions and problems.


News

CIPRES now offers Pythia
December 18, 2023 - 9:54 am
CIPRES now offers SPAdes for de novo DNA assembly
September 01, 2023 - 1:47 pm