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The CIPRES Science Gateway V. 3.3

The CIPRES Science Gateway V. 3.3 is a public resource for inference of large phylogenetic trees. It is designed to provide all researchers with access to NSF XSEDE's large computational resources through a simple browser interface.

High Performance Parallel Codes for Large Tree Inference and Sequence Alignment on XSEDE:
RAxML (8.0.24); MrBayes (3.2.2); GARLI (2.01); BEAST(1.8.0); MAFFT (7.058); PhyloBayes MPI (1.4f); DPPDIV (1.0); and FastTree (2.1.7).

Serial Codes for Tree Inference:
PAUP* (Inference by Parsimony); Poy (Alignment and Inference);

Serial Codes for Sequence Alignment:
ClustalW; Contralign; FSA; MUSCLE; PROBCONS; PROBALIGN


News

If your cloned RAxML job is failing suddenly, please read this….
August 20, 2014 - 8:55 am
CIPRES supported 248 new publications Jan - Jun 2014
April 16, 2014 - 5:10 am

Locations of last 1000 users





 

CIPRES – Cyberinfrastructure for Phylogenic Research