SeqBoot REST

SEQBOOT

SeqBoot is from Phylip. SEQBOOT is a general bootstrapping tool. It is intended to allow you to generate multiple data sets that are resampled versions of the input data set. Since almost all programs in the package can analyze these multiple data sets, this allows almost anything in this package to be bootstrapped, jackknifed, or permuted. SEQBOOT can handle molecular sequences, binary characters, restriction sites, or gene frequencies.

toolId=SEQBOOT

input.infile_ - Primary Input File
input.weights_file_ - weights file
input.categories_file_ - categories file

vparam.runtime_ - Float - Maximum Hours to Run 72 max, default=1.0
vparam.interleaved_ - Switch - Input Sequences Interleaved? default=0
vparam.data_type_ - Excl - Data type sequence (default); morph; rest; freq.
vparam.method_ - Excl - bootstrap (default), jackknife, permute.
vparam.seed_ - Integer - (no default).
vparam.replicates_ - Integer - (default=100).
vparam.alleles_ - Switch - All alleles present at each locus (default: no, one absent at each locus) (A) (default=0).
vparam.percentage_ - Float - What fraction of the characters? (no default).
vparam.Bbootstrap_ - Integer - Block Bootstrap (no default).
vparam.weights_ - Switch - Weights: upload a weightsfile (default=0).
vparam.categories_ - Switch - Categories: upload a categories file (default=0).
vparam.produce multiple weights file_ - Switch - (default=0).

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