Get 1000 Hours free
On the UCSD Supercomputer
Start Your TrialEPA-ng is a complete rewrite of the Evolutionary Placement Algorithm (EPA), previously implemented in RAxML. It uses libpll and pll-modules to perform maximum likelihood-based phylogenetic placement of genetic sequences on a user-supplied reference tree and alignment.
bfast
-fileIf you use EPA-ng, please cite:Pierre Barbera, Alexey M Kozlov, Lucas Czech, Benoit Morel, Diego Darriba, Tomáš Flouri, Alexandros Stamatakis, EPA-ng: Massively Parallel Evolutionary Placement of Genetic Sequences, Systematic Biology, Volume 68, Issue 2, March 2019, Pages 365–369, https://doi.org/10.1093/sysbio/syy054