You can use the test files below to try some simple tests of the tools we offer.
For more detailed testing, each code has a help page that provides sample input and output files for that specific code.
Please view the demo usage videos under the Help tab for additional guidance.
Fasta for sequence alignment codes:
Aligned sequences for gene tree inference codes:
Aligned Fasta: aligned_fasta.afa
Relaxed Phylip: relaxed_phylip_sample.phy
BEAST, BEAST2, and ASTRAL example files were created by the codes' developers.
BEAST (xml): beast_benchmark1.xml
BEAST2 (xml): primate-mtDNA_beast2.xml
Gene tree collectiions for Species Tree inference (ASTRAL):
ASTRAL (NEWICK): astral_infile.tre
CIPRES – Cyberinfrastructure for Phylogenic Research