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The CIPRES Science Gateway V. 3.3 is a public resource for inference of large phylogenetic trees. It is designed to provide all researchers with access to NSF XSEDE's large computational resources through a simple browser interface. Through a collaboration with Alexandros Stamatakis and Wayne Pfeiffer, we now offer the fastest hybrid versions of RAxML [pdf] and MrBayes [pdf] currently available, as well as RAxML-Light 1.0.9 (through our partnership with the iPlant collaborative).
High Performance Parallel Codes for Large Tree Inference and Sequence Alignment on XSEDE:
RAxML (8.0.0); MrBayes (3.1.2 and 3.2.2); GARLI (2.01); BEAST(1.8.0); MAFFT (7.058); PhyloBayes MPI (1.4f); DPPDIV (1.0)
CIPRES – Cyberinfrastructure for Phylogenic Research